Create a UCSC bed graph with the HOMER suite
meta
:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]
tagDir
:directory
The ‘Tag Directory’
bedGraph
*.bedGraph.gz
:file
The UCSC bed graph
versions_homer
${task.process}
:string
The name of the process
homer
The name of the tool
4.11
The expression to obtain the version of the tool
versions
HOMER (Hypergeometric Optimization of Motif EnRichment) is a suite of tools for Motif Discovery and next-gen sequencing analysis.
