container_configs

PipelineLint.container_configs()

Check that the container configuration files in conf/ are up to date.

Scans all meta.yml files under modules/ that contain a containers key, reads the process name from the sibling main.nf, and regenerates the container configuration files in conf/. Uses git diff to detect changes. If not in --fix mode the working tree is restored to its original state afterwards.

Can be skipped by adding the following to the .nf-core.yml file:

lint:
  container_configs: False